About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides47689-
Paelopatides47690INTERLEUKIN-1 RECEPTOR FAMILY MEMBER
Paelopatides47691IMPORTIN-7, 8, 11
Paelopatides47692RAB FAMILY
Paelopatides47693PROTEIN CBG26694
Paelopatides47694ZINC FINGER PROTEIN
Paelopatides47695REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides47698-
Paelopatides47699-
Paelopatides47700-
Paelopatides47701ANKYRIN REPEAT DOMAIN 36-RELATED
Paelopatides47702ZINC FINGER CCHC DOMAIN CONTAINING PROTEIN
Paelopatides47703-
Paelopatides47704PF6
Paelopatides47705-
Paelopatides47706-
Paelopatides47707REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides47708-
Paelopatides47709REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides47710PROTEIN CBG26694
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