About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides47564-
Paelopatides47565ALPHA- 1,3 -FUCOSYLTRANSFERASE
Paelopatides47566-
Paelopatides47567RETROTRANSPOSON
Paelopatides47568RETROTRANSPOSON
Paelopatides47569-
Paelopatides47570-
Paelopatides47571-
Paelopatides47572-
Paelopatides47573-
Paelopatides47574-
Paelopatides47575-
Paelopatides47576-
Paelopatides47577PROTEIN CBG26694
Paelopatides47579ACTIN
Paelopatides47581SODIUM/CHLORIDE DEPENDENT TRANSPORTER
Paelopatides47582KINESIN-RELATED
Paelopatides47583-
Paelopatides47584INTRAFLAGELLAR TRANSPORT PROTEIN 20 HOMOLOG
Paelopatides47585-
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