About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides47515-
Paelopatides47516CARBOXYLESTERASE
Paelopatides47517-
Paelopatides47518ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides47519ECTONUCLEOTIDE PYROPHOSPHATASE/PHOSPHODIESTERASE
Paelopatides47520-
Paelopatides47521TRANSCRIPTIONAL REPRESSOR CTCFL-RELATED
Paelopatides47522GLYCOLIPID TRANSFER PROTEIN-RELATED
Paelopatides47523ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Paelopatides47524GUANYLATE BINDING PROTEIN
Paelopatides47525ACROSIN-RELATED
Paelopatides47526CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides47527PROTEASOME INHIBITOR
Paelopatides47528AQUAPORIN TRANSPORTER
Paelopatides47529-
Paelopatides47530AUTOSOMAL HIGHLY CONSERVED PROTEIN
Paelopatides47531-
Paelopatides47532CYTOCHROME P450 FAMILY 4
Paelopatides47533-
Paelopatides47534-
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