About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides47414ENDONUCLEASE-RELATED
Paelopatides47415-
Paelopatides47416-
Paelopatides47417-
Paelopatides47418TRANSPOSON
Paelopatides47419-
Paelopatides4742052 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED
Paelopatides47421-
Paelopatides47422UBIQUITIN-ACTIVATING ENZYME E1
Paelopatides47423OLIGORIBONUCLEASE, MITOCHONDRIAL
Paelopatides47424-
Paelopatides47425PRA1 PROTEIN
Paelopatides47426PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides47427REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides47428MAP/MICROTUBULE AFFINITY-REGULATING KINASE
Paelopatides47429NICOLIN 1
Paelopatides47430AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED
Paelopatides47431AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED
Paelopatides47433F5/8 TYPE C DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides47434GABA-B RECEPTOR
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