About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides47347GAG-RELATED PROTEIN
Paelopatides47348EPM2A-INTERACTING PROTEIN 1
Paelopatides47349TRANSPOSON
Paelopatides47350-
Paelopatides47351ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Paelopatides47352IP13529P
Paelopatides47353ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides47354GUANYLYL CYCLASE
Paelopatides47355SIGNAL RECOGNITION PARTICLE 72
Paelopatides47356-
Paelopatides47361-
Paelopatides47362FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides47363ORIGIN RECOGNITION COMPLEX SUBUNIT 2
Paelopatides47364PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides47365PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides47366ORIGIN RECOGNITION COMPLEX SUBUNIT 2
Paelopatides47367PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides47368UNCHARACTERIZED
Paelopatides47369STEROIDOGENIC ACUTE REGULATORY PROTEIN-LIKE
Paelopatides47370PROTEIN GAMETE EXPRESSED 1
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