About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides47391PEPTIDASE S8
Paelopatides47392REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides47393-
Paelopatides47394MYND-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides47395G-PROTEIN COUPLED RECEPTOR
Paelopatides47396-
Paelopatides473975-HYDROXYTRYPTAMINE RECEPTOR
Paelopatides47398REPRESSOR OF RNA POLYMERASE III TRANSCRIPTION MAF1
Paelopatides47399-
Paelopatides47400POL PROTEIN
Paelopatides47401-
Paelopatides47402-
Paelopatides47403TRANSPOSON TY3-I GAG-POL POLYPROTEIN
Paelopatides47404PROTEIN CBG26694
Paelopatides47405-
Paelopatides47406-
Paelopatides47409CENTROSOMAL PROTEIN OF 41 KDA
Paelopatides47411UNCHARACTERIZED
Paelopatides47412TRANSPOSON
Paelopatides47413-
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