About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides47455PROTEIN CBG26694
Paelopatides47456PROTEIN CBG26694
Paelopatides47457F20B24.22
Paelopatides47458PHOX (PX) DOMAIN-CONTAINING PROTEIN
Paelopatides47459-
Paelopatides47460-
Paelopatides47461BETA TRANSDUCIN-RELATED PROTEIN
Paelopatides47462-
Paelopatides47463NUCLEOTIDE-SUGAR TRANSMEMBRANE TRANSPORTER
Paelopatides47464CHAPERONE ATP11
Paelopatides47465-
Paelopatides47466REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides47467TYROSINE-PROTEIN KINASE
Paelopatides47468-
Paelopatides47469TYROSINE-PROTEIN KINASE
Paelopatides47470-
Paelopatides47471TYROSINE-PROTEIN KINASE
Paelopatides47472E3 UBIQUITIN-PROTEIN LIGASE HECTD3
Paelopatides47473ENDONUCLEASE
Paelopatides47474-
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