About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides47495TPR REPEAT CONTAINING PROTEIN
Paelopatides47496-
Paelopatides47497PHOSPHATIDYLINOSITOL-GLYCAN BIOSYNTHESIS CLASS F PROTEIN-RELATED
Paelopatides47498-
Paelopatides47499DYNEIN REGULATORY COMPLEX PROTEIN 8
Paelopatides47500-
Paelopatides47501REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides47502ENOYL-COA HYDRATASE
Paelopatides47503-
Paelopatides47504-
Paelopatides47505-
Paelopatides47506GH3 DOMAIN-CONTAINING PROTEIN
Paelopatides47507-
Paelopatides47508-
Paelopatides47509-
Paelopatides47510BIFUNCTIONAL POLYMYXIN RESISTANCE PROTEIN ARNA
Paelopatides47511REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides47512POL PROTEIN
Paelopatides47513ENDONUCLEASE-RELATED
Paelopatides47514-
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