About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides47435GABA-B RECEPTOR
Paelopatides47436GABA-B RECEPTOR
Paelopatides47437DEVELOPMENTALLY REGULATED GTP-BINDING PROTEIN-RELATED
Paelopatides47438-
Paelopatides47439G DOMAIN-CONTAINING PROTEIN
Paelopatides47440STEROID 17-ALPHA-HYDROXYLASE/17,20 LYASE
Paelopatides47441CYTOCHROME P450 508A4-RELATED
Paelopatides47442PROTEIN CBG26694
Paelopatides47443EXPRESSED PROTEIN
Paelopatides47444-
Paelopatides47445-
Paelopatides47446BEN DOMAIN-CONTAINING PROTEIN 6
Paelopatides47447ADHESION G PROTEIN-COUPLED RECEPTOR G7
Paelopatides47448NACHT DOMAIN-CONTAINING PROTEIN
Paelopatides47449PROTEASE M14 CARBOXYPEPTIDASE
Paelopatides47450METALLOPROTEASE INHIBITOR
Paelopatides47451-
Paelopatides47452-
Paelopatides47453ELONGATION FACTOR TU-RELATED
Paelopatides47454PROTEIN CBG26694
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