About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides47475RETROTRANSPOSON
Paelopatides47476-
Paelopatides47477G-PROTEIN COUPLED RECEPTOR
Paelopatides47478LEUCOKININ RECEPTOR-RELATED
Paelopatides47479REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides47480FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides47481FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides47482-
Paelopatides47483LEUCINE-RICH REPEAT-CONTAINING
Paelopatides47484-
Paelopatides47485FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides47486FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides47487UNCHARACTERIZED
Paelopatides47488FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides47489FUMARATE HYDRATASE-RELATED
Paelopatides47490FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides47491-
Paelopatides47492G-PROTEIN COUPLED RECEPTOR
Paelopatides47493BLUE CHEESE
Paelopatides47494-
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