About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides47535-
Paelopatides47536-
Paelopatides47537REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides47538MEIOTIC CHECKPOINT REGULATOR TSG24 FAMILY MEMBER
Paelopatides47539POL PROTEIN
Paelopatides47540-
Paelopatides47549KRUEPPEL-LIKE TRANSCRIPTION FACTOR
Paelopatides47550-
Paelopatides47551-
Paelopatides47552-
Paelopatides47553-
Paelopatides47554PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides47555PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides47556BEN DOMAIN-CONTAINING PROTEIN 5
Paelopatides47557TRANSPOSON TY3-I GAG-POL POLYPROTEIN
Paelopatides47558-
Paelopatides47559OXIDASE/PEROXIDASE
Paelopatides47560TUBULIN POLYGLUTAMYLASE
Paelopatides47561REVERSE TRANSCRIPTASES
Paelopatides47563CELL SURFACE GLYCOPROTEIN MUC18-RELATED
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