About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides47245-
Paelopatides47246BOMBESIN RECEPTOR-ACTIVATED PROTEIN C6ORF89
Paelopatides47247MYOTROPHIN
Paelopatides47248ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides47249REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides47250SET DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides47251-
Paelopatides47252REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides47253-
Paelopatides47254BUCENTAUR RELATED
Paelopatides47255-
Paelopatides47256RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING
Paelopatides47257SORTING NEXIN
Paelopatides47258-
Paelopatides47259REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides47260REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides47261PROTEIN MONO-ADP-RIBOSYLTRANSFERASE PARP4
Paelopatides47262ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 22
Paelopatides47263PROTEIN MONO-ADP-RIBOSYLTRANSFERASE PARP4
Paelopatides47264ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
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