About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides47205LATROPHILIN RECEPTOR-LIKE PROTEIN A
Paelopatides47206SLR5058 PROTEIN
Paelopatides47207NETRIN RECEPTOR UNC5
Paelopatides47208FAS-ASSOCIATING DEATH DOMAIN-CONTAINING PROTEIN FADD
Paelopatides47209-
Paelopatides47210-
Paelopatides47211-
Paelopatides47212CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides47213SEPIAPTERIN REDUCTASE
Paelopatides47214PARANEOPLASTIC ANTIGEN
Paelopatides47215-
Paelopatides47216POLYPHOSPHOINOSITIDE PHOSPHATASE
Paelopatides47217CHOLESTEROL OXIDASE
Paelopatides47218ENDONUCLEASE-RELATED
Paelopatides47219-
Paelopatides47220E3 UBIQUITIN-PROTEIN LIGASE KCMF1
Paelopatides47221-
Paelopatides47222PROTEIN CBG26694
Paelopatides47223SPECTRIN/FILAMIN RELATED CYTOSKELETAL PROTEIN
Paelopatides47224T-SNARE COILED-COIL HOMOLOGY DOMAIN-CONTAINING PROTEIN
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