About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides47105DET1- AND DDB1-ASSOCIATED PROTEIN 1
Paelopatides47106EGF-LIKE DOMAIN-CONTAINING PROTEIN
Paelopatides47107-
Paelopatides47108PULMONARY SURFACTANT-ASSOCIATED PROTEIN A
Paelopatides47109-
Paelopatides47110THIAMINE PYROPHOSPHATE ENZYMES
Paelopatides47111THIAMINE PYROPHOSPHATE ENZYMES
Paelopatides47112THIAMINE PYROPHOSPHATE ENZYMES
Paelopatides47113PROTEIN CBG26694
Paelopatides47114PROTEIN CBG26694
Paelopatides47115UBIQUITIN CARBOXYL-TERMINAL HYDROLASE
Paelopatides47116-
Paelopatides47117-
Paelopatides47118EPM2A-INTERACTING PROTEIN 1
Paelopatides47119UNCHARACTERIZED
Paelopatides47120-
Paelopatides47121-
Paelopatides47122ENZYMATIC POLYPROTEIN-RELATED
Paelopatides47123ADRENERGIC RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
Paelopatides47124ADRENERGIC RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
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