About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides47065CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides47066NON-LTR RETROLELEMENT REVERSE TRANSCRIPTASE-LIKE PROTEIN-RELATED
Paelopatides47067PROTEIN, PUTATIVE-RELATED
Paelopatides47068SI:CH211-262H13.3-RELATED-RELATED
Paelopatides47069-
Paelopatides47070CELL DIVISION PROTEIN KINASE
Paelopatides47071-
Paelopatides47072DNA-DIRECTED RNA POLYMERASE I SUBUNIT 2
Paelopatides47073PROTEIN CBG26694
Paelopatides47074-
Paelopatides47075-
Paelopatides47076CHROMOSOME 20 ORF85 FAMILY MEMBER
Paelopatides47077V-TYPE PROTON ATPASE SUBUNIT H
Paelopatides47078-
Paelopatides47079PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides47080PROTEIN CBG26694
Paelopatides47081PROTEIN CBG26694
Paelopatides47082ATP-DEPENDENT DNA HELICASE
Paelopatides47083ATP-DEPENDENT DNA HELICASE
Paelopatides47084PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
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