About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides46944NUCLEAR HORMONE RECEPTOR
Paelopatides46945-
Paelopatides46946-
Paelopatides46947BREAST CANCER TYPE 2 SUSCEPTIBILITY PROTEIN BRCA2
Paelopatides46948REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides46949CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides46950GLUCOSYLCERAMIDASE
Paelopatides46951-
Paelopatides46952ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides46953PROTEIN CBG26694
Paelopatides46954G-PROTEIN COUPLED RECEPTOR TKR-1-RELATED
Paelopatides46955TRANSPOSABLE ELEMENT-RELATED
Paelopatides46956RIKEN CDNA D130052B06 GENE
Paelopatides46957-
Paelopatides46958PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides46959-
Paelopatides46960-
Paelopatides46961-
Paelopatides46962-
Paelopatides46963PROTEIN CBG26694
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