About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides46924-
Paelopatides46925UPF0573 PROTEIN C2ORF70
Paelopatides46926ADP-RIBOSYL CYCLASE
Paelopatides46927TRANSPOSASE, PUTATIVE-RELATED
Paelopatides46928ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides46929ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides46930ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Paelopatides46931-
Paelopatides46932F5/8 TYPE C DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides46933CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides46934CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides46935-
Paelopatides46936-
Paelopatides46937HEAT SHOCK 70 KDA PROTEIN 14
Paelopatides46938UNCHARACTERIZED
Paelopatides46939-
Paelopatides46940-
Paelopatides46941-
Paelopatides46942LIPID PHOSPHATE PHOSPHATASE
Paelopatides46943PROTEIN CBG26694
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