About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides46813AMINO ACID TRANSPORTER
Paelopatides46814AMINO ACID TRANSPORTER
Paelopatides46815AMINO ACID TRANSPORTER
Paelopatides46816AMINO ACID TRANSPORTER
Paelopatides46817-
Paelopatides46820CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides46821-
Paelopatides46822GENERAL TRANSCRIPTION FACTOR 2-RELATED ZINC FINGER PROTEIN
Paelopatides46823ENZYMATIC POLYPROTEIN-RELATED
Paelopatides46824TRANSPOSON TY3-I GAG-POL POLYPROTEIN
Paelopatides46825CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides46826CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides46827GH17980P-RELATED
Paelopatides46828REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides46829-
Paelopatides46830-
Paelopatides46831ISLET CELL AUTOANTIGEN 1
Paelopatides46832-
Paelopatides46833-
Paelopatides46834CYTIDINE MONOPHOSPHATE-N-ACETYLNEURAMINIC ACID HYDROXYLASE
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