About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides46709BONUS, ISOFORM C-RELATED
Paelopatides46710BONUS, ISOFORM C-RELATED
Paelopatides46711EUKARYOTIC ELONGATION FACTOR 2 KINASE-RELATED
Paelopatides46712ENDONUCLEASE-RELATED
Paelopatides46713PARANEOPLASTIC ANTIGEN
Paelopatides46714PROTEIN CBG26694
Paelopatides46715-
Paelopatides46716SI:CH211-196P9.1-RELATED
Paelopatides46717CASEIN KINASE-RELATED
Paelopatides46718PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides46719CASEIN KINASE-RELATED
Paelopatides46720RIBOSOMAL PROTEIN S7
Paelopatides46721UNCHARACTERIZED
Paelopatides46722ENDONUCLEASE-RELATED
Paelopatides46723BONUS, ISOFORM C-RELATED
Paelopatides46724-
Paelopatides46725-
Paelopatides46726REVERSE TRANSCRIPTASE
Paelopatides46728TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 6B
Paelopatides46729-
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