About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides46669NACHT DOMAIN-CONTAINING PROTEIN
Paelopatides46670-
Paelopatides46671-
Paelopatides46672REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides46673-
Paelopatides46674REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides46675RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE
Paelopatides46676-
Paelopatides46677-
Paelopatides46678PROTEASE FAMILY S9B,C DIPEPTIDYL-PEPTIDASE IV-RELATED
Paelopatides46679REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides46680-
Paelopatides46681-
Paelopatides46682SOLUTE CARRIER FAMILY 39
Paelopatides46683COILED-COIL DOMAIN-CONTAINING PROTEIN 13
Paelopatides46684L1 TRANSPOSABLE ELEMENT-RELATED
Paelopatides46685-
Paelopatides46686CYTOCHROME P450 FAMILY 46 SUBFAMILY A
Paelopatides46687CYTOCHROME P450 FAMILY 46 SUBFAMILY A
Paelopatides46688PROTEIN CBG26694
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