About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides46564-
Paelopatides46565NADH:UBIQUINONE OXIDOREDUCTASE B18-LIKE SUBUNIT
Paelopatides46566FATTY ACID ACYL TRANSFERASE-RELATED
Paelopatides46567-
Paelopatides46568PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides46569-
Paelopatides46570MPS ONE BINDER KINASE ACTIVATOR-LIKE MOB
Paelopatides46571-
Paelopatides46572PROTEIN CBG26694
Paelopatides46574-
Paelopatides46575C2H2 ZINC FINGER CGI-62-RELATED
Paelopatides46576SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED
Paelopatides46577PRESENILIN
Paelopatides46578TYROSINE-PROTEIN KINASE
Paelopatides46579REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides46580VESICULAR, OVEREXPRESSED IN CANCER, PROSURVIVAL PROTEIN 1
Paelopatides46581SI:CH73-250A16.5-RELATED
Paelopatides46582-
Paelopatides46583-
Paelopatides46584FIBRINOGEN/TENASCIN/ANGIOPOEITIN
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