About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides46444PROTEIN CBG26694
Paelopatides46445-
Paelopatides46446PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides46447N-LYSINE METHYLTRANSFERASE KMT5A
Paelopatides46448-
Paelopatides46449-
Paelopatides46450ANTIGEN BSP, PUTATIVE-RELATED
Paelopatides46451BUCENTAUR RELATED
Paelopatides46452-
Paelopatides46453ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides46454-
Paelopatides46455-
Paelopatides46456FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides46457CELL DIVISION PROTEIN KINASE
Paelopatides46458-
Paelopatides46459INOSINE TRIPHOSPHATE PYROPHOSPHATASE/HAM1 PROTEIN
Paelopatides46460REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides46461CYTOCHROME P450 508A4-RELATED
Paelopatides46462-
Paelopatides46463-
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