About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides46404PROTEIN CBG12474
Paelopatides46405SEVEN TRANSMEMBRANE PROTEIN 1-RELATED
Paelopatides46406SEVEN TRANSMEMBRANE PROTEIN 1-RELATED
Paelopatides46407-
Paelopatides46408PROPERDIN
Paelopatides46409PROTEIN LZIC
Paelopatides46410SI:CH211-108C17.2-RELATED-RELATED
Paelopatides46411ENDOGLIN/TGF-BETA RECEPTOR TYPE III
Paelopatides46412-
Paelopatides46413REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides46414-
Paelopatides46415-
Paelopatides46416EXS-RELATED PROTEIN
Paelopatides46417-
Paelopatides46418PULMONARY SURFACTANT-ASSOCIATED PROTEIN A
Paelopatides46419NON-LTR RETROLELEMENT REVERSE TRANSCRIPTASE-LIKE PROTEIN-RELATED
Paelopatides46420NON-LTR RETROLELEMENT REVERSE TRANSCRIPTASE-LIKE PROTEIN-RELATED
Paelopatides46421AGAP005574-PA
Paelopatides464224.1 G PROTEIN
Paelopatides46423ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
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