About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides46279UNCHARACTERIZED
Paelopatides46280-
Paelopatides46281-
Paelopatides46282INTEGRASE CATALYTIC DOMAIN-CONTAINING PROTEIN
Paelopatides46283NEUROBLAST DIFFERENTIATION-ASSOCIATED PROTEIN AHNAK-LIKE PROTEIN
Paelopatides46284-
Paelopatides46285ADENOSINE KINASE
Paelopatides46286BUCENTAUR RELATED
Paelopatides46287REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides46288MYND-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides46289-
Paelopatides46290SUGAR KINASE
Paelopatides46291SUGAR KINASE
Paelopatides46292XPA-BINDING PROTEIN 1-RELATED
Paelopatides46293NUCLEAR SPECKLE SPLICING REGULATORY PROTEIN 1
Paelopatides46294-
Paelopatides46295PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides46296-
Paelopatides46297PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides46298PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
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