About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides46195-
Paelopatides46196TRIPLE QXXK/R MOTIF-CONTAINING PROTEIN
Paelopatides46197TARGETING PROTEIN FOR XKLP2
Paelopatides46198TRANSPOSABLE ELEMENT-RELATED
Paelopatides46199TRANSPOSABLE ELEMENT-RELATED
Paelopatides46200-
Paelopatides46201FLAP ENDONUCLEASE FAMILY MEMBER
Paelopatides46202PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides46203-
Paelopatides46204ATP-DEPENDENT RNA HELICASE RHLE-RELATED
Paelopatides46205-
Paelopatides46206-
Paelopatides46207-
Paelopatides46208TRANSMEMBRANE PROTEIN
Paelopatides46209-
Paelopatides46210HYR DOMAIN-CONTAINING PROTEIN
Paelopatides46211HYR DOMAIN-CONTAINING PROTEIN
Paelopatides46212PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides46213SLR5058 PROTEIN
Paelopatides46214L1 TRANSPOSABLE ELEMENT-RELATED
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