About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides46215-
Paelopatides46216PROTEIN CBG26694
Paelopatides46217ADRENERGIC RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
Paelopatides46218-
Paelopatides46219UBIQUITIN THIOESTERASE
Paelopatides46220-
Paelopatides46221-
Paelopatides46222G-PROTEIN COUPLED RECEPTOR
Paelopatides46223FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides46224-
Paelopatides46225B2 BRADYKININ RECEPTOR/ANGIOTENSIN II RECEPTOR
Paelopatides46226CYSTEINE AND GLYCINE-RICH PROTEIN 2 BINDING PROTEIN
Paelopatides46228-
Paelopatides46229-
Paelopatides46230ENDONUCLEASE-RELATED
Paelopatides46231-
Paelopatides46232FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides46235RETROTRANSPOSON
Paelopatides46236RETROTRANSPOSON
Paelopatides46237-
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