About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides46424-
Paelopatides46425ENDONUCLEASE-RELATED
Paelopatides46426POL PROTEIN
Paelopatides46427-
Paelopatides46428-
Paelopatides46429EXPRESSED PROTEIN
Paelopatides46430-
Paelopatides46431RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR AT 64C, ISOFORM A
Paelopatides46432-
Paelopatides46433-
Paelopatides46434SI:CH211-196P9.1-RELATED
Paelopatides46435CATION TRANSPORTING ATPASE
Paelopatides46436REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides46437REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides46438-
Paelopatides46439REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides46440MITOCHONDRIAL RIBOSOMAL PROTEIN 63
Paelopatides46441-
Paelopatides46442-
Paelopatides46443-
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