About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides46504-
Paelopatides46505CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides46506CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides46507CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides46508-
Paelopatides46509-
Paelopatides46510REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides46511ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides46512PLEXIN
Paelopatides46513EPM2A-INTERACTING PROTEIN 1
Paelopatides46514PLEXIN
Paelopatides46515INTEGRASE CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides46516PROTEIN CBG26694
Paelopatides46517PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides46518SEQUESTOSOME 1-RELATED
Paelopatides46519-
Paelopatides46520-
Paelopatides46521SI:CH211-108C17.2-RELATED-RELATED
Paelopatides46522DUF614 FAMILY PROTEIN-RELATED
Paelopatides46523-
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