About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides46730SPROUTY-RELATED, EVH1 DOMAIN-CONTAINING PROTEIN FAMILY MEMBER
Paelopatides46731REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides46732LEUCOKININ RECEPTOR-RELATED
Paelopatides46733REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides46734-
Paelopatides46735-
Paelopatides46736-
Paelopatides46737LEUCINE RICH REPEAT FAMILY PROTEIN
Paelopatides46738-
Paelopatides46739-
Paelopatides46740G PROTEIN-COUPLED RECEPTOR-RELATED
Paelopatides46741ZINC FINGER PROTEIN WITH KRAB AND SCAN DOMAINS
Paelopatides46742ZGC:195170
Paelopatides46743REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides46744-
Paelopatides46745-
Paelopatides46746GAMMA TUBULIN COMPLEX PROTEIN
Paelopatides46747BONUS, ISOFORM C-RELATED
Paelopatides46748METHIONYL-TRNA SYNTHETASE
Paelopatides4674920 KD NUCLEAR CAP BINDING PROTEIN
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