About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides47165GLUTATHIONE S-TRANSFERASE
Paelopatides47166ANKYRIN REPEAT AND STERILE ALPHA MOTIF DOMAIN-CONTAINING PROTEIN 1
Paelopatides47167PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides47168GAG-RELATED PROTEIN
Paelopatides47169ZINC FINGER CCHC DOMAIN-CONTAINING PROTEIN 7
Paelopatides47170METALLOPROTEASE INHIBITOR
Paelopatides47171STEERIN
Paelopatides47172-
Paelopatides47173SERINE PROTEASE
Paelopatides47174-
Paelopatides47175STEERIN
Paelopatides47176-
Paelopatides47177GUANYLYL CYCLASE
Paelopatides47178REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides47179-
Paelopatides47180THAP DOMAIN PROTEIN
Paelopatides47181-
Paelopatides47182HYDROXYSTEROID DEHYDROGENASE 1M
Paelopatides47183TELO2-INTERACTING PROTEIN 2
Paelopatides47184-
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