About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides47752-
Paelopatides47753TYROSINE-PROTEIN KINASE
Paelopatides47754EPM2A-INTERACTING PROTEIN 1
Paelopatides47755REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides47756-
Paelopatides47757ADRENERGIC RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
Paelopatides47758-
Paelopatides47759-
Paelopatides47760PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides47761PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides47762REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides47763PROTEIN CBG26694
Paelopatides47764-
Paelopatides47765LATROPHILIN RECEPTOR-LIKE PROTEIN A
Paelopatides47766ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides47767-
Paelopatides47768-
Paelopatides47769ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides47770HEPARAN SULFATE 2-O-SULFOTRANSFERASE
Paelopatides47771EXPRESSED PROTEIN
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