About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides47873SOLUTE CARRIER FAMILY 22 MEMBER
Paelopatides47874ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Paelopatides47875ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Paelopatides47876-
Paelopatides47877REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides47878-
Paelopatides47879-
Paelopatides47880-
Paelopatides4788152 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED
Paelopatides47882ANDROGEN-INDUCED PROTEIN 1-RELATED
Paelopatides47883INTEGRASE CORE DOMAIN CONTAINING PROTEIN
Paelopatides47884ANDROGEN-INDUCED PROTEIN 1-RELATED
Paelopatides47886-
Paelopatides47887PROLINE-SERINE-THREONINE PHOSPHATASE INTERACTING PROTEIN 1
Paelopatides47888TRANSPOSABLE ELEMENT-RELATED
Paelopatides47889PROLINE-SERINE-THREONINE PHOSPHATASE INTERACTING PROTEIN 1
Paelopatides47890MAINTENANCE OF TELOMOERE CAPPING
Paelopatides47891MAINTENANCE OF TELOMOERE CAPPING
Paelopatides47892INTER-ALPHA-TRYPSIN INHIBITOR HEAVY CHAIN FAMILY MEMBER
Paelopatides47893INTER-ALPHA-TRYPSIN INHIBITOR HEAVY CHAIN FAMILY MEMBER
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