About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides47976TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
Paelopatides47977TRACE AMINE-ASSOCIATED RECEPTOR 19N-RELATED
Paelopatides47978-
Paelopatides47979CYSTEINE-RICH MOTOR NEURON 1 PROTEIN
Paelopatides47982-
Paelopatides47983ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL
Paelopatides47984-
Paelopatides47985-
Paelopatides47986FIBROSIN FAMILY MEMBER
Paelopatides47987-
Paelopatides47988FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides47989ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides47990PROTEIN CBG16428
Paelopatides47991TYROSINE-PROTEIN KINASE RECEPTOR
Paelopatides47992TYROSINE-PROTEIN KINASE RECEPTOR
Paelopatides47993POLYCYSTIC KIDNEY AND HEPATIC DISEASE 1 (AUTOSOMAL RECESSIVE)-LIKE 1
Paelopatides47994POLYCYSTIC KIDNEY AND HEPATIC DISEASE 1 (AUTOSOMAL RECESSIVE)-LIKE 1
Paelopatides47995POLYCYSTIC KIDNEY AND HEPATIC DISEASE 1 (AUTOSOMAL RECESSIVE)-LIKE 1
Paelopatides47996POLYCYSTIC KIDNEY AND HEPATIC DISEASE 1 (AUTOSOMAL RECESSIVE)-LIKE 1
Paelopatides47997DIHYDROPTERIDINE REDUCTASE
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