About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides48018DYNEIN INTERMEDIATE CHAIN
Paelopatides48019-
Paelopatides48020ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides48021REVERSE TRANSCRIPTASES
Paelopatides48022-
Paelopatides48023REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides48024PROTEIN CBG26694
Paelopatides48025ALPHA- 1,3 -FUCOSYLTRANSFERASE
Paelopatides48026COUNTIN RECEPTOR CNR3-RELATED
Paelopatides48027POL PROTEIN
Paelopatides48028SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN
Paelopatides48029BUCENTAUR RELATED
Paelopatides48030OPSIN
Paelopatides48031G PROTEIN-COUPLED RECEPTOR
Paelopatides48032SRCR DOMAIN-CONTAINING PROTEIN
Paelopatides48033-
Paelopatides48034GDP-FUCOSE PROTEIN O-FUCOSYLTRANSFERASE 1
Paelopatides48035-
Paelopatides48036REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides48037-
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