About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides48058-
Paelopatides48059-
Paelopatides48060-
Paelopatides48061-
Paelopatides48062-
Paelopatides48063MULTICOPPER OXIDASE-RELATED
Paelopatides48064STEREOCILIN RELATED
Paelopatides48065-
Paelopatides48066VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED
Paelopatides48067PROTEIN-COUPLED RECEPTOR GPR1, PUTATIVE-RELATED
Paelopatides48068VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED
Paelopatides48069FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides48070REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides48071C5ORF31
Paelopatides48072FORKHEAD BOX PROTEIN
Paelopatides48073DNA POLYMERASE THETA, PUTATIVE (AFU_ORTHOLOGUE AFUA_1G05260)-RELATED
Paelopatides48074S-ANTIGEN PROTEIN
Paelopatides48075ADHESION G-PROTEIN COUPLED RECEPTOR V1
Paelopatides48076NON-SPECIFIC LETHAL 1, ISOFORM M
Paelopatides48077-
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