About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides48104ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides48105RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN
Paelopatides48106ISLET CELL AUTOANTIGEN 1
Paelopatides48107-
Paelopatides48108-
Paelopatides48109FARNESYL-DIPHOSPHATE FARNESYLTRANSFERASE
Paelopatides48110PROTEIN CBG26694
Paelopatides48111CCHC-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides48112REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides48113FAS-ASSOCIATING DEATH DOMAIN-CONTAINING PROTEIN FADD
Paelopatides48114POL PROTEIN
Paelopatides48115NACHT DOMAIN-CONTAINING PROTEIN
Paelopatides48116OS05G0310600 PROTEIN
Paelopatides48118-
Paelopatides48119-
Paelopatides48120-
Paelopatides48121ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides48122PROTEIN CBG26694
Paelopatides48123CRUMBS FAMILY MEMBER
Paelopatides48124AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED
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