About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides48166RIBOSOMAL S SUBUNIT
Paelopatides48167RIBOSOMAL S SUBUNIT
Paelopatides48168RIBOSOMAL S SUBUNIT
Paelopatides48169RIBOSOMAL S SUBUNIT
Paelopatides48170RIBOSOMAL S SUBUNIT
Paelopatides48171-
Paelopatides48172RIBOSOMAL S SUBUNIT
Paelopatides48173-
Paelopatides48174NEUROPEPTIDE Y RECEPTOR
Paelopatides48175-
Paelopatides48176CCR4 NOT-RELATED
Paelopatides48177CENTROSOMAL PROTEIN OF 131 KDA
Paelopatides48178-
Paelopatides48179-
Paelopatides48180-
Paelopatides481813'-5' EXONUCLEASE ERI1-RELATED
Paelopatides48182GTPASE, IMAP FAMILY MEMBER-RELATED
Paelopatides48183NACHT DOMAIN-CONTAINING PROTEIN
Paelopatides48184FAS-ASSOCIATING DEATH DOMAIN-CONTAINING PROTEIN FADD
Paelopatides48185DED DOMAIN-CONTAINING PROTEIN
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