About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides48078ASPARTATE AMINOTRANSFERASE
Paelopatides48079PROTEIN CBG26694
Paelopatides48080-
Paelopatides48081ASPARTATE AMINOTRANSFERASE
Paelopatides48082-
Paelopatides48083EXPRESSED PROTEIN
Paelopatides48084TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
Paelopatides48085-
Paelopatides48086-
Paelopatides48093FAS-ASSOCIATING DEATH DOMAIN-CONTAINING PROTEIN FADD
Paelopatides48094ATP-DEPENDENT RNA HELICASE
Paelopatides48095DNAJ HOMOLOG SUBFAMILY C MEMBER 4
Paelopatides48096-
Paelopatides48097UNCHARACTERIZED
Paelopatides48098TRANSCRIPTION INITIATION FACTOR IIB-RELATED
Paelopatides48099BTB/POZ DOMAIN-CONTAINING
Paelopatides48100-
Paelopatides48101-
Paelopatides48102TRANSCRIPTION INITIATION FACTOR IIB-RELATED
Paelopatides48103TRANSCRIPTION INITIATION FACTOR IIB-RELATED
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