About Trachythela sp. YZ-2020

Cold-water corals Trachythela sp. YZ-2020 are important habitats for creatures in the deep-sea environment, but they have been degraded by anthropogenic activity. They live in the cold, dark, and hypoxic deep-sea waters and are widespread around the world. Most of them must attach to hard-bottom substrates to grow, and only a few can live on soft sediments. Due to the lack of symbiotic zooxanthellae, they do not require sunlight as a source of energy, and their major source of nutrients is the microscopic zooplankton that comes from passing currents or descends from the surface of the ocean.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Trachythela sp. YZ-2020CnidariaTrachythela sp., Cold-water corals (CWCs)Cold seep/Hydrothermal vent～1068slope of the Xisha Trough (18°53′N, 112°66′E, July 2019) in the South China Sea (SCS)2770514

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
IDSSE_Tra_sp_1.0578.2MbContig2020JADLSH01Institute of Deep-Sea Science and Engineering,Chinese Academy of SciencesPRJNA66197590.70%35,305

References
TitleJournalPubmed ID
The First Draft Genome of a Cold-Water Coral Trachythela sp. (Alcyonacea: Stolonifera: Clavulariidae)Genome Biology and Evolution33331875

Gene Information

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Gene IDDescription
Clavulariidae_g19
Clavulariidae_g190
Clavulariidae_g1900LUNG SEVEN TRANSMEMBRANE RECEPTOR
Clavulariidae_g19000
Clavulariidae_g19001PROTEIN CBG26694
Clavulariidae_g19002ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Clavulariidae_g19003PROTEIN CBG26694
Clavulariidae_g19004FLAP ENDONUCLEASE FAMILY MEMBER
Clavulariidae_g19005
Clavulariidae_g19006
Clavulariidae_g19007REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Clavulariidae_g19008ENDONUCLEASE RELATED
Clavulariidae_g19009ELONGATION FACTOR 1 ALPHA
Clavulariidae_g1901IST1 FAMILY MEMBER
Clavulariidae_g19010REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Clavulariidae_g19011F5/8 TYPE C DOMAIN-CONTAINING PROTEIN-RELATED
Clavulariidae_g19012
Clavulariidae_g19013
Clavulariidae_g19014
Clavulariidae_g19015
Clavulariidae_g19016SI:CH211-108C17.2-RELATED-RELATED
Clavulariidae_g19017
Clavulariidae_g19018STEROID 17-ALPHA-HYDROXYLASE/17,20 LYASE
Clavulariidae_g19019REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Clavulariidae_g1902UBIQUITIN-ACTIVATING ENZYME E1
Clavulariidae_g19020
Clavulariidae_g19021OTU DOMAIN CONTAINING PROTEIN
Clavulariidae_g19022ATP-DEPENDENT DNA HELICASE
Clavulariidae_g19023ATP-DEPENDENT DNA HELICASE
Clavulariidae_g19024PROTEIN CBG26694
Clavulariidae_g19025PROTEIN CBG26694
Clavulariidae_g19026
Clavulariidae_g19027STEROID 17-ALPHA-HYDROXYLASE/17,20 LYASE
Clavulariidae_g19028CYTOCHROME P450 508A4-RELATED
Clavulariidae_g19029
Clavulariidae_g1903GLYCINE-RICH CELL WALL STRUCTURAL PROTEIN 1-LIKE
Clavulariidae_g19030ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Clavulariidae_g19031STEROID 17-ALPHA-HYDROXYLASE/17,20 LYASE
Clavulariidae_g19032PHD-TYPE DOMAIN-CONTAINING PROTEIN
Clavulariidae_g19033RETROTRANSPOSON
Clavulariidae_g19034PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Clavulariidae_g19035THAP DOMAIN-CONTAINING
Clavulariidae_g19036THAP DOMAIN PROTEIN
Clavulariidae_g19037EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN
Clavulariidae_g19038
Clavulariidae_g19039
Clavulariidae_g1904TENASCIN
Clavulariidae_g19040REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Clavulariidae_g19041STEROID 17-ALPHA-HYDROXYLASE/17,20 LYASE
Clavulariidae_g19042
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