About Trachythela sp. YZ-2020

Cold-water corals Trachythela sp. YZ-2020 are important habitats for creatures in the deep-sea environment, but they have been degraded by anthropogenic activity. They live in the cold, dark, and hypoxic deep-sea waters and are widespread around the world. Most of them must attach to hard-bottom substrates to grow, and only a few can live on soft sediments. Due to the lack of symbiotic zooxanthellae, they do not require sunlight as a source of energy, and their major source of nutrients is the microscopic zooplankton that comes from passing currents or descends from the surface of the ocean.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Trachythela sp. YZ-2020CnidariaTrachythela sp., Cold-water corals (CWCs)Cold seep/Hydrothermal vent～1068slope of the Xisha Trough (18°53′N, 112°66′E, July 2019) in the South China Sea (SCS)2770514

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
IDSSE_Tra_sp_1.0578.2MbContig2020JADLSH01Institute of Deep-Sea Science and Engineering,Chinese Academy of SciencesPRJNA66197590.70%35,305

References
TitleJournalPubmed ID
The First Draft Genome of a Cold-Water Coral Trachythela sp. (Alcyonacea: Stolonifera: Clavulariidae)Genome Biology and Evolution33331875

Gene Information

<< First 172 173 174 175 176 177 178 179 180 181 Forward> Last>>        725 pages in total

Gene IDDescription
Clavulariidae_g17964ALPHA- 1,3 -FUCOSYLTRANSFERASE
Clavulariidae_g17965ENGULFMENT AND CELL MOTILITY
Clavulariidae_g17966BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE
Clavulariidae_g17967REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Clavulariidae_g17968CHORDIN
Clavulariidae_g17969CXC DOMAIN-CONTAINING PROTEIN-RELATED
Clavulariidae_g1797REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Clavulariidae_g17970REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Clavulariidae_g17971DNA POLYMERASE
Clavulariidae_g17972
Clavulariidae_g17973COLLAGEN ALPHA
Clavulariidae_g17974REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Clavulariidae_g17975L1 TRANSPOSABLE ELEMENT-RELATED
Clavulariidae_g17976
Clavulariidae_g17977
Clavulariidae_g17978ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Clavulariidae_g17979DNA POLYMERASE
Clavulariidae_g1798C2H2-TYPE DOMAIN-CONTAINING PROTEIN
Clavulariidae_g17980
Clavulariidae_g17981CELL CYCLE CHECKPOINT PROTEIN RAD1
Clavulariidae_g17982PROTEIN CBG26694
Clavulariidae_g17983PROTEIN CBG26694
Clavulariidae_g17984REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Clavulariidae_g17985ROUND SPERMATID BASIC PROTEIN 1
Clavulariidae_g17986DEDICATOR OF CYTOKINESIS
Clavulariidae_g17987
Clavulariidae_g17988CEREBELLIN-RELATED
Clavulariidae_g17989
Clavulariidae_g1799C2H2-TYPE DOMAIN-CONTAINING PROTEIN
Clavulariidae_g17990SH3 DOMAIN-CONTAINING
Clavulariidae_g17991NUCLEAR HORMONE RECEPTOR
Clavulariidae_g17992SEC10
Clavulariidae_g17993PROTEIN CBG26694
Clavulariidae_g17994ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Clavulariidae_g17995
Clavulariidae_g17996
Clavulariidae_g17997RETROTRANSPOSON
Clavulariidae_g17998COLLAGEN ALPHA
Clavulariidae_g17999
Clavulariidae_g18RGM DOMAIN FAMILY MEMBER DRAG-1
Clavulariidae_g180STEROL O-ACYLTRANSFERASE
Clavulariidae_g1800REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Clavulariidae_g18000
Clavulariidae_g18001
Clavulariidae_g18002DNA POLYMERASE
Clavulariidae_g18003RNA RECOGNITION RRM/RNP DOMAIN
Clavulariidae_g18004RAI16 PROTEIN-RELATED
Clavulariidae_g18005ENDONUCLEASE III-LIKE PROTEIN 1
Clavulariidae_g18006
Clavulariidae_g18007-
TOP