About Trachythela sp. YZ-2020

Cold-water corals Trachythela sp. YZ-2020 are important habitats for creatures in the deep-sea environment, but they have been degraded by anthropogenic activity. They live in the cold, dark, and hypoxic deep-sea waters and are widespread around the world. Most of them must attach to hard-bottom substrates to grow, and only a few can live on soft sediments. Due to the lack of symbiotic zooxanthellae, they do not require sunlight as a source of energy, and their major source of nutrients is the microscopic zooplankton that comes from passing currents or descends from the surface of the ocean.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Trachythela sp. YZ-2020CnidariaTrachythela sp., Cold-water corals (CWCs)Cold seep/Hydrothermal vent～1068slope of the Xisha Trough (18°53′N, 112°66′E, July 2019) in the South China Sea (SCS)2770514

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
IDSSE_Tra_sp_1.0578.2MbContig2020JADLSH01Institute of Deep-Sea Science and Engineering,Chinese Academy of SciencesPRJNA66197590.70%35,305

References
TitleJournalPubmed ID
The First Draft Genome of a Cold-Water Coral Trachythela sp. (Alcyonacea: Stolonifera: Clavulariidae)Genome Biology and Evolution33331875

Gene Information

<< First 162 163 164 165 166 167 168 169 170 171 Forward> Last>>        725 pages in total

Gene IDDescription
Clavulariidae_g17513ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Clavulariidae_g17514STRUCTURAL MAINTENANCE OF CHROMOSOMES 5,6 SMC5, SMC6
Clavulariidae_g17515
Clavulariidae_g17516
Clavulariidae_g17517
Clavulariidae_g17518
Clavulariidae_g17519
Clavulariidae_g1752RETROTRANSPOSON
Clavulariidae_g17520UNCHARACTERIZED
Clavulariidae_g17521RETROTRANSPOSON
Clavulariidae_g17522PERFORIN-LIKE PROTEIN 1
Clavulariidae_g17523PERFORIN-LIKE PROTEIN 1
Clavulariidae_g17524TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 8
Clavulariidae_g17525
Clavulariidae_g17526
Clavulariidae_g17527RETROTRANSPOSON
Clavulariidae_g17528
Clavulariidae_g17529
Clavulariidae_g1753
Clavulariidae_g17530ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Clavulariidae_g17531ADP RIBOSYLATION FACTOR-RELATED
Clavulariidae_g17532ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Clavulariidae_g17533PROTEIN CBG26694
Clavulariidae_g17534SERINE-THREONINE PROTEIN KINASE
Clavulariidae_g17535
Clavulariidae_g17536HMG DOMAIN-CONTAINING PROTEIN 3
Clavulariidae_g17537ENDONUCLEASE-RELATED
Clavulariidae_g17538
Clavulariidae_g17539SIMILAR TO RIKEN CDNA E130308A19
Clavulariidae_g1754EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN
Clavulariidae_g17540EXPRESSED PROTEIN
Clavulariidae_g17541
Clavulariidae_g17542CXC DOMAIN-CONTAINING PROTEIN-RELATED
Clavulariidae_g17543PROTEIN CBG26694
Clavulariidae_g17544
Clavulariidae_g17545CXC DOMAIN-CONTAINING PROTEIN-RELATED
Clavulariidae_g17546EPITHELIAL CELL-TRANSFORMING SEQUENCE 2 ONCOGENE-LIKE
Clavulariidae_g17547RAS-RELATED PROTEIN RAB
Clavulariidae_g17548REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Clavulariidae_g17549LETHAL 2 GIANT LARVAE PROTEIN
Clavulariidae_g1755THAP DOMAIN PROTEIN
Clavulariidae_g17550SERINE/THREONINE-PROTEIN KINASE
Clavulariidae_g17551ZINC FINGER MYND DOMAIN-CONTAINING
Clavulariidae_g17552POTASSIUM CHANNEL TETRAMERIZATION DOMAIN-CONTAINING
Clavulariidae_g17553POTASSIUM CHANNEL TETRAMERIZATION DOMAIN-CONTAINING
Clavulariidae_g17554POTASSIUM CHANNEL TETRAMERIZATION DOMAIN-CONTAINING
Clavulariidae_g17555POTASSIUM CHANNEL TETRAMERIZATION DOMAIN-CONTAINING
Clavulariidae_g17556POTASSIUM CHANNEL TETRAMERIZATION DOMAIN-CONTAINING
Clavulariidae_g17557POTASSIUM CHANNEL TETRAMERIZATION DOMAIN-CONTAINING
Clavulariidae_g17558POTASSIUM CHANNEL TETRAMERIZATION DOMAIN-CONTAINING
TOP