About Trachythela sp. YZ-2020

Cold-water corals Trachythela sp. YZ-2020 are important habitats for creatures in the deep-sea environment, but they have been degraded by anthropogenic activity. They live in the cold, dark, and hypoxic deep-sea waters and are widespread around the world. Most of them must attach to hard-bottom substrates to grow, and only a few can live on soft sediments. Due to the lack of symbiotic zooxanthellae, they do not require sunlight as a source of energy, and their major source of nutrients is the microscopic zooplankton that comes from passing currents or descends from the surface of the ocean.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Trachythela sp. YZ-2020CnidariaTrachythela sp., Cold-water corals (CWCs)Cold seep/Hydrothermal vent～1068slope of the Xisha Trough (18°53′N, 112°66′E, July 2019) in the South China Sea (SCS)2770514

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
IDSSE_Tra_sp_1.0578.2MbContig2020JADLSH01Institute of Deep-Sea Science and Engineering,Chinese Academy of SciencesPRJNA66197590.70%35,305

References
TitleJournalPubmed ID
The First Draft Genome of a Cold-Water Coral Trachythela sp. (Alcyonacea: Stolonifera: Clavulariidae)Genome Biology and Evolution33331875

Gene Information

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Gene IDDescription
Clavulariidae_g17379REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Clavulariidae_g1738
Clavulariidae_g17380PROTEIN CBG26694
Clavulariidae_g17381
Clavulariidae_g17382REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Clavulariidae_g17383AEROLYSIN-LIKE PROTEIN-RELATED
Clavulariidae_g17384SIGNAL PEPTIDE PEPTIDASE
Clavulariidae_g17385MITOGEN-ACTIVATED PROTEIN KINASE
Clavulariidae_g17386ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Clavulariidae_g17387HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED
Clavulariidae_g17388
Clavulariidae_g17389IP01015P-RELATED
Clavulariidae_g1739TRANSPOSON TY3-I GAG-POL POLYPROTEIN
Clavulariidae_g17390
Clavulariidae_g17391
Clavulariidae_g17392ZINC FINGER PROTEIN 200
Clavulariidae_g17393ZINC FINGER PROTEIN
Clavulariidae_g17394KRUEPPEL-LIKE TRANSCRIPTION FACTOR
Clavulariidae_g17395KINESIN LIGHT CHAIN
Clavulariidae_g17396KINESIN LIGHT CHAIN
Clavulariidae_g17397
Clavulariidae_g17398DNA HELICASE RECQ FAMILY MEMBER
Clavulariidae_g17399MEIOTIC CHECKPOINT REGULATOR TSG24 FAMILY MEMBER
Clavulariidae_g174GLUTATHIONE S-TRANSFERASE KAPPA
Clavulariidae_g1740REVERSE TRANSCRIPTASES
Clavulariidae_g17400PHOSPHOTYROSINE INTERACTION DOMAIN-CONTAINING FAMILY MEMBER
Clavulariidae_g17401GRB2-ASSOCIATED AND REGULATOR OF MAPK PROTEIN FAMILY MEMBER
Clavulariidae_g17402GRB2-ASSOCIATED AND REGULATOR OF MAPK PROTEIN FAMILY MEMBER
Clavulariidae_g17403NG5
Clavulariidae_g17404
Clavulariidae_g17405
Clavulariidae_g17406GRB2-ASSOCIATED AND REGULATOR OF MAPK PROTEIN FAMILY MEMBER
Clavulariidae_g17407GRB2-ASSOCIATED AND REGULATOR OF MAPK PROTEIN FAMILY MEMBER
Clavulariidae_g17408GRB2-ASSOCIATED AND REGULATOR OF MAPK PROTEIN FAMILY MEMBER
Clavulariidae_g17409GRB2-ASSOCIATED AND REGULATOR OF MAPK PROTEIN FAMILY MEMBER
Clavulariidae_g1741AGAP005574-PA
Clavulariidae_g17410
Clavulariidae_g17411GRB2-ASSOCIATED AND REGULATOR OF MAPK PROTEIN FAMILY MEMBER
Clavulariidae_g17412GRB2-ASSOCIATED AND REGULATOR OF MAPK PROTEIN FAMILY MEMBER
Clavulariidae_g17413TRANSMEMBRANE PROTEIN 68
Clavulariidae_g17414APC REGULATOR OF WNT-SIGNALING PATHWAY-RELATED
Clavulariidae_g17415
Clavulariidae_g17416THAP DOMAIN PROTEIN
Clavulariidae_g17417
Clavulariidae_g17418REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Clavulariidae_g17419
Clavulariidae_g1742
Clavulariidae_g17420AEROLYSIN-LIKE PROTEIN-RELATED
Clavulariidae_g17421APC REGULATOR OF WNT-SIGNALING PATHWAY-RELATED
Clavulariidae_g17422APC REGULATOR OF WNT-SIGNALING PATHWAY-RELATED
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