About Trachythela sp. YZ-2020

Cold-water corals Trachythela sp. YZ-2020 are important habitats for creatures in the deep-sea environment, but they have been degraded by anthropogenic activity. They live in the cold, dark, and hypoxic deep-sea waters and are widespread around the world. Most of them must attach to hard-bottom substrates to grow, and only a few can live on soft sediments. Due to the lack of symbiotic zooxanthellae, they do not require sunlight as a source of energy, and their major source of nutrients is the microscopic zooplankton that comes from passing currents or descends from the surface of the ocean.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Trachythela sp. YZ-2020CnidariaTrachythela sp., Cold-water corals (CWCs)Cold seep/Hydrothermal vent~1068slope of the Xisha Trough (18°53′N, 112°66′E, July 2019) in the South China Sea (SCS)2770514

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
IDSSE_Tra_sp_1.0578.2MbContig2020JADLSH01Institute of Deep-Sea Science and Engineering,Chinese Academy of SciencesPRJNA66197590.70%35,305

References
TitleJournalPubmed ID
The First Draft Genome of a Cold-Water Coral Trachythela sp. (Alcyonacea: Stolonifera: Clavulariidae)Genome Biology and Evolution33331875

Gene Information

<< First 160 161 162 163 164 165 166 167 168 169 Forward> Last>>        725 pages in total

Gene IDDescription
Clavulariidae_g17423ARGININE/DIAMINOPIMELATE/ORNITHINE DECARBOXYLASE
Clavulariidae_g17424CYSTEINE PROTEASE FAMILY C1-RELATED
Clavulariidae_g17425REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Clavulariidae_g17426UNCHARACTERIZED
Clavulariidae_g17427POTE ANKYRIN DOMAIN
Clavulariidae_g17428CYTOSOLIC CARBOXYPEPTIDASE
Clavulariidae_g17429RNA HELICASE
Clavulariidae_g1743
Clavulariidae_g17430CARBAMOYLTRANSFERASE FAMILY MEMBER
Clavulariidae_g17431GLR0591 PROTEIN
Clavulariidae_g17432GLR0591 PROTEIN
Clavulariidae_g17433
Clavulariidae_g17434GLR0591 PROTEIN
Clavulariidae_g17435NAD-DEPENDENT PROTEIN DEACYLASE SIRTUIN-5, MITOCHONDRIAL-RELATED
Clavulariidae_g17436PROTEIN-COUPLED RECEPTOR GPR1, PUTATIVE-RELATED
Clavulariidae_g17437
Clavulariidae_g17438
Clavulariidae_g17439GUANINE NUCLEOTIDE EXCHANGE FACTOR
Clavulariidae_g1744REVERSE TRANSCRIPTASE
Clavulariidae_g17440DISCOIDIN, CUB, EGF, LAMININ , AND ZINC METALLOPROTEASE DOMAIN CONTAINING
Clavulariidae_g17441FTP DOMAIN-CONTAINING PROTEIN
Clavulariidae_g17442FTP DOMAIN-CONTAINING PROTEIN
Clavulariidae_g17443ATP-DEPENDENT RNA HELICASE DBP3
Clavulariidae_g17444IP01015P-RELATED
Clavulariidae_g17445
Clavulariidae_g17446MYOTONIC DYSTROPHY S/T KINASE-RELATED
Clavulariidae_g17447SOX TRANSCRIPTION FACTOR
Clavulariidae_g17448HISTONE DEACETYLASE HDAC1-RELATED
Clavulariidae_g17449E3 UBIQUITIN-PROTEIN LIGASE HECTD3
Clavulariidae_g1745TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
Clavulariidae_g17450
Clavulariidae_g17451PROTEIN PHOSPHATASE 2C
Clavulariidae_g17452
Clavulariidae_g17453LD33804P
Clavulariidae_g17454PHD-TYPE DOMAIN-CONTAINING PROTEIN
Clavulariidae_g17455PROTEIN CBG26694
Clavulariidae_g17456
Clavulariidae_g17457
Clavulariidae_g17458
Clavulariidae_g17459
Clavulariidae_g1746
Clavulariidae_g17460
Clavulariidae_g17461NEUROTRANSMITTER GATED ION CHANNEL
Clavulariidae_g17462MITOGEN-ACTIVATED PROTEIN KINASE
Clavulariidae_g17463REGULATOR OF G PROTEIN SIGNALING
Clavulariidae_g17464SYNTAXIN
Clavulariidae_g17465
Clavulariidae_g17466FIBRILLIN-RELATED
Clavulariidae_g17467
Clavulariidae_g17468FINGER PUTATIVE TRANSCRIPTION FACTOR FAMILY-RELATED
TOP