About Trachythela sp. YZ-2020

Cold-water corals Trachythela sp. YZ-2020 are important habitats for creatures in the deep-sea environment, but they have been degraded by anthropogenic activity. They live in the cold, dark, and hypoxic deep-sea waters and are widespread around the world. Most of them must attach to hard-bottom substrates to grow, and only a few can live on soft sediments. Due to the lack of symbiotic zooxanthellae, they do not require sunlight as a source of energy, and their major source of nutrients is the microscopic zooplankton that comes from passing currents or descends from the surface of the ocean.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Trachythela sp. YZ-2020CnidariaTrachythela sp., Cold-water corals (CWCs)Cold seep/Hydrothermal vent～1068slope of the Xisha Trough (18°53′N, 112°66′E, July 2019) in the South China Sea (SCS)2770514

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
IDSSE_Tra_sp_1.0578.2MbContig2020JADLSH01Institute of Deep-Sea Science and Engineering,Chinese Academy of SciencesPRJNA66197590.70%35,305

References
TitleJournalPubmed ID
The First Draft Genome of a Cold-Water Coral Trachythela sp. (Alcyonacea: Stolonifera: Clavulariidae)Genome Biology and Evolution33331875

Gene Information

<< First 135 136 137 138 139 140 141 142 143 144 Forward> Last>>        725 pages in total

Gene IDDescription
Clavulariidae_g16299TRANSPOSASE, PUTATIVE-RELATED
Clavulariidae_g163PX DOMAIN-CONTAINING PROTEIN
Clavulariidae_g1630NUCLEAR HORMONE RECEPTOR
Clavulariidae_g16300TRANSPOSASE, PUTATIVE-RELATED
Clavulariidae_g16301REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Clavulariidae_g16302INNER MEMBRANE TRANSPORT PROTEIN YAJR
Clavulariidae_g16303PROTEIN CBG26694
Clavulariidae_g16304PROTEIN CBG26694
Clavulariidae_g16305ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Clavulariidae_g16306
Clavulariidae_g16307REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Clavulariidae_g16308
Clavulariidae_g16309
Clavulariidae_g1631THREONINE-TRNA LIGASE
Clavulariidae_g16310INTEGRASE CATALYTIC DOMAIN-CONTAINING PROTEIN
Clavulariidae_g16311
Clavulariidae_g16312
Clavulariidae_g16313SI:DKEY-29D5.2
Clavulariidae_g16314INNER MEMBRANE TRANSPORT PROTEIN YAJR
Clavulariidae_g16315PROTEIN CBG26694
Clavulariidae_g16316REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Clavulariidae_g16317REVERSE TRANSCRIPTASES
Clavulariidae_g16318RETROTRANSPOSON
Clavulariidae_g16319REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Clavulariidae_g1632CYCLIN-DEPENDENT KINASE INHIBITOR-RELATED PROTEIN
Clavulariidae_g16320RETROTRANSPOSON
Clavulariidae_g16321RETROTRANSPOSON
Clavulariidae_g16322RETROTRANSPOSON
Clavulariidae_g16323RETROTRANSPOSON
Clavulariidae_g16324RETROTRANSPOSON
Clavulariidae_g16325REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Clavulariidae_g16326RETROTRANSPOSON
Clavulariidae_g16327RETROTRANSPOSON
Clavulariidae_g16328ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Clavulariidae_g16329RETROTRANSPOSON
Clavulariidae_g1633UBIQUITIN-CONJUGATING ENZYME E2
Clavulariidae_g16330PROTEIN CBG26694
Clavulariidae_g16331REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Clavulariidae_g16332
Clavulariidae_g16333
Clavulariidae_g16334PROTEIN CBG26694
Clavulariidae_g16335PROTEIN CBG26694
Clavulariidae_g16336ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Clavulariidae_g16337ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Clavulariidae_g16338CYTOSOLIC CARBOXYPEPTIDASE
Clavulariidae_g16339ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Clavulariidae_g1634SURVIVAL MOTOR NEURON-LIKE PROTEIN 1
Clavulariidae_g16340BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED
Clavulariidae_g16341RETROTRANSPOSON
Clavulariidae_g16342SIMILAR TO RIKEN CDNA E130308A19
TOP