About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides00249-
Paelopatides00250ANKYRIN REPEAT FAMILY PROTEIN
Paelopatides00251GTPASE, IMAP FAMILY MEMBER-RELATED
Paelopatides00252-
Paelopatides00253-
Paelopatides00254SRCR DOMAIN-CONTAINING PROTEIN
Paelopatides00255SRCR DOMAIN-CONTAINING PROTEIN
Paelopatides00256SRCR DOMAIN-CONTAINING PROTEIN
Paelopatides00257FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides00258PROTEIN CBG26694
Paelopatides00259TRANSPOSON TY3-I GAG-POL POLYPROTEIN
Paelopatides00260ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides00261-
Paelopatides00262-
Paelopatides00263-
Paelopatides00264-
Paelopatides00265CELL DIVISION PROTEIN KINASE
Paelopatides00266PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides00267PROTEIN CBG26694
Paelopatides00268-
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