The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides00619 | |
| Paelopatides00620 | EPM2A-INTERACTING PROTEIN 1 |
| Paelopatides00621 | |
| Paelopatides00622 | ENDONUCLEASE |
| Paelopatides00624 | |
| Paelopatides00625 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides00626 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
| Paelopatides00627 | B2 BRADYKININ RECEPTOR/ANGIOTENSIN II RECEPTOR |
| Paelopatides00628 | SOX TRANSCRIPTION FACTOR |
| Paelopatides00629 | NETRIN RECEPTOR UNC5 |
| Paelopatides00630 | CXXC-TYPE ZINC FINGER PROTEIN 1 |
| Paelopatides00631 | |
| Paelopatides00632 | HOMEOBOX PROTEIN |
| Paelopatides00633 | HOMEOBOX PROTEIN |
| Paelopatides00634 | TYROSINE-PROTEIN KINASE |
| Paelopatides00635 | BUCENTAUR RELATED |
| Paelopatides00636 | D-2-HYDROXYGLUTARATE DEHYDROGENASE, MITOCHONDRIAL |
| Paelopatides00637 | |
| Paelopatides00638 | NUCLEAR FACTOR INTERLEUKIN-3-REGULATED PROTEIN |
| Paelopatides00639 | |
| Paelopatides00640 | |
| Paelopatides00641 | |
| Paelopatides00642 | |
| Paelopatides00643 | |
| Paelopatides00644 | TRANSPOSON |
| Paelopatides00645 | |
| Paelopatides00646 | C-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 180 |
| Paelopatides00647 | |
| Paelopatides00648 | DDE_TNP_IS1595 DOMAIN-CONTAINING PROTEIN |
| Paelopatides00649 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
| Paelopatides00650 | |
| Paelopatides00651 | |
| Paelopatides00652 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides00653 | BONUS, ISOFORM C-RELATED |
| Paelopatides00654 | D-GLUTAMATE CYCLASE, MITOCHONDRIAL |
| Paelopatides00656 | |
| Paelopatides00657 | ENZYMATIC POLYPROTEIN-RELATED |
| Paelopatides00658 | RABIN3-RELATED |
| Paelopatides00659 | PINSTRIPE, ISOFORM A |
| Paelopatides00660 | PINSTRIPE, ISOFORM A |
| Paelopatides00661 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides00662 | |
| Paelopatides00663 | |
| Paelopatides00664 | FATTY ACID ACYL TRANSFERASE-RELATED |
| Paelopatides00665 | ZINC FINGER CCCH DOMAIN-CONTAINING PROTEI |
| Paelopatides00666 | |
| Paelopatides00667 | SUPPRESSOR OF TY 5 |
| Paelopatides00668 | |
| Paelopatides00669 | |
| Paelopatides00670 | HEME-BINDING PROTEIN-RELATED |
