The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides00416 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
| Paelopatides00417 | |
| Paelopatides00418 | |
| Paelopatides00419 | ENDONUCLEASE |
| Paelopatides00420 | |
| Paelopatides00421 | - |
| Paelopatides00422 | EPM2A-INTERACTING PROTEIN 1 |
| Paelopatides00423 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides00424 | BONUS, ISOFORM C-RELATED |
| Paelopatides00425 | BETA-GALACTOSIDASE RELATED |
| Paelopatides00426 | BETA-GALACTOSIDASE RELATED |
| Paelopatides00427 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
| Paelopatides00428 | BETA-GALACTOSIDASE RELATED |
| Paelopatides00429 | TRANSPOSON |
| Paelopatides00430 | REVERSE TRANSCRIPTASE |
| Paelopatides00431 | ODD-SKIPPED - RELATED |
| Paelopatides00432 | |
| Paelopatides00433 | |
| Paelopatides00434 | |
| Paelopatides00436 | JOUBERIN |
| Paelopatides00437 | - |
| Paelopatides00438 | CANCER-RELATED NUCLEOSIDE-TRIPHOSPHATASE |
| Paelopatides00439 | SERINE/THREONINE-PROTEIN PHOSPHATASE 5-RELATED |
| Paelopatides00440 | CS DOMAIN-CONTAINING PROTEIN |
| Paelopatides00441 | CS DOMAIN-CONTAINING PROTEIN |
| Paelopatides00442 | CS DOMAIN-CONTAINING PROTEIN |
| Paelopatides00443 | CS DOMAIN-CONTAINING PROTEIN |
| Paelopatides00444 | REVERSE TRANSCRIPTASES |
| Paelopatides00445 | - |
| Paelopatides00446 | SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN |
| Paelopatides00447 | G-PROTEIN COUPLED RECEPTOR |
| Paelopatides00448 | LEUCOKININ RECEPTOR-RELATED |
| Paelopatides00449 | |
| Paelopatides00450 | |
| Paelopatides00451 | |
| Paelopatides00452 | |
| Paelopatides00453 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides00454 | |
| Paelopatides00455 | |
| Paelopatides00457 | |
| Paelopatides00458 | |
| Paelopatides00459 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides00460 | |
| Paelopatides00461 | SLR5058 PROTEIN |
| Paelopatides00462 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
| Paelopatides00463 | |
| Paelopatides00464 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides00465 | STRAWBERRY NOTCH-RELATED |
| Paelopatides00466 | |
| Paelopatides00467 | STRAWBERRY NOTCH-RELATED |
