About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides00164CYSTEINE-RICH SECRETORY PROTEIN-RELATED
Paelopatides00165-
Paelopatides00166AN1-TYPE ZINC FINGER PROTEIN 4
Paelopatides00167PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides00168-
Paelopatides00169-
Paelopatides00170GTPASE, IMAP FAMILY MEMBER-RELATED
Paelopatides00171GTPASE, IMAP FAMILY MEMBER-RELATED
Paelopatides00172-
Paelopatides00173AGAP005574-PA
Paelopatides00174ZINC FINGER PROTEIN
Paelopatides00175-
Paelopatides00176ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides00177FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides00179-
Paelopatides00180REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides00183STEROID 17-ALPHA-HYDROXYLASE/17,20 LYASE
Paelopatides00184AGAP006772-PA
Paelopatides00185-
Paelopatides00186-
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