About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides00123TRANSPOSASE, PUTATIVE-RELATED
Paelopatides00124FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides00125-
Paelopatides00126REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides00127THIOSULFATE SULFERTANSFERASE
Paelopatides00128ENDONUCLEASE-RELATED
Paelopatides00129SOLUTE CARRIER FAMILY 2
Paelopatides00130NISCHARIN RELATED
Paelopatides00131ENZYMATIC POLYPROTEIN-RELATED
Paelopatides00132-
Paelopatides00133-
Paelopatides00134ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides00135STEROL DESATURASE-RELATED PROTEIN
Paelopatides00136REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides00137OS05G0424000 PROTEIN-RELATED
Paelopatides00138-
Paelopatides00139ENDONUCLEASE-RELATED
Paelopatides00140GLYCINE N-METHYLTRANSFERASE
Paelopatides00141-
Paelopatides00142NEUROTRANSMITTER GATED ION CHANNEL
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