The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides00208 | |
| Paelopatides00209 | SI:CH211-196P9.1-RELATED |
| Paelopatides00210 | |
| Paelopatides00211 | |
| Paelopatides00212 | REVERSE TRANSCRIPTASES |
| Paelopatides00213 | ENDONUCLEASE-RELATED |
| Paelopatides00214 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides00215 | H/ACA RIBONUCLEOPROTEIN COMPLEX NON-CORE SUBUNIT NAF1 |
| Paelopatides00216 | |
| Paelopatides00217 | ENDONUCLEASE-RELATED |
| Paelopatides00218 | |
| Paelopatides00219 | |
| Paelopatides00220 | PROTEIN KINASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides00221 | NETRIN RECEPTOR UNC5 |
| Paelopatides00222 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides00223 | |
| Paelopatides00224 | HISTAMINE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR |
| Paelopatides00225 | PHOSPHATIDYLINOSITOL-GLYCAN BIOSYNTHESIS CLASS F PROTEIN-RELATED |
| Paelopatides00226 | UNCHARACTERIZED |
| Paelopatides00227 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides00228 | BUCENTAUR RELATED |
| Paelopatides00229 | SCAVENGER RECEPTOR DOMAIN-CONTAINING |
| Paelopatides00230 | |
| Paelopatides00231 | |
| Paelopatides00232 | COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING |
| Paelopatides00234 | |
| Paelopatides00235 | UNCHARACTERIZED |
| Paelopatides00236 | TRANSCRIPTASE, PUTATIVE-RELATED-RELATED |
| Paelopatides00237 | |
| Paelopatides00238 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides00239 | |
| Paelopatides00240 | |
| Paelopatides00241 | ACIDIC FIBROBLAST GROWTH FACTOR INTRACELLULAR BINDING PROTEIN |
| Paelopatides00242 | ACIDIC FIBROBLAST GROWTH FACTOR INTRACELLULAR BINDING PROTEIN |
| Paelopatides00243 | UBX DOMAIN-CONTAINING PROTEIN 1 |
| Paelopatides00244 | |
| Paelopatides00245 | |
| Paelopatides00246 | |
| Paelopatides00247 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides00248 | |
| Paelopatides00249 | |
| Paelopatides00250 | ANKYRIN REPEAT FAMILY PROTEIN |
| Paelopatides00251 | GTPASE, IMAP FAMILY MEMBER-RELATED |
| Paelopatides00252 | |
| Paelopatides00253 | |
| Paelopatides00254 | SRCR DOMAIN-CONTAINING PROTEIN |
| Paelopatides00255 | SRCR DOMAIN-CONTAINING PROTEIN |
| Paelopatides00256 | SRCR DOMAIN-CONTAINING PROTEIN |
| Paelopatides00257 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
| Paelopatides00258 | PROTEIN CBG26694 |
