About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40%57,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides00259TRANSPOSON TY3-I GAG-POL POLYPROTEIN
Paelopatides00260ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides00261
Paelopatides00262
Paelopatides00263
Paelopatides00264
Paelopatides00265CELL DIVISION PROTEIN KINASE
Paelopatides00266PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides00267PROTEIN CBG26694
Paelopatides00268
Paelopatides00269REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides00270SRCR DOMAIN-CONTAINING PROTEIN
Paelopatides00271
Paelopatides00272
Paelopatides00273
Paelopatides00274LITHOSTATHINE
Paelopatides00275NECTIN-RELATED
Paelopatides00276FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides00277REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides00278BUCENTAUR RELATED
Paelopatides00279TRACE AMINE-ASSOCIATED RECEPTOR 19N-RELATED
Paelopatides00280E3 UBIQUITIN-PROTEIN LIGASE RAD18
Paelopatides00281ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 39-RELATED
Paelopatides00282
Paelopatides00283PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides00284CELL DIVISION CYCLE 20 CDC20 FIZZY -RELATED
Paelopatides00285
Paelopatides00286
Paelopatides00287POL PROTEIN
Paelopatides00288ENZYMATIC POLYPROTEIN-RELATED
Paelopatides00289ENDONUCLEASE-RELATED
Paelopatides00290
Paelopatides00291PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides00292ATP-DEPENDENT RNA HELICASE DBP3
Paelopatides00293STEROL ISOMERASE
Paelopatides00294RAS, DI-RAS, AND RHEB FAMILY MEMBERS OF SMALL GTPASE SUPERFAMILY
Paelopatides00295PHOSPHOLIPASE A-2-ACTIVATING PROTEIN
Paelopatides00296
Paelopatides00297
Paelopatides00298FI04643P-RELATED
Paelopatides00299PHENYLALANYL-TRNA SYNTHETASE
Paelopatides00300BARDET-BIEDL SYNDROME 10 PROTEIN
Paelopatides00301
Paelopatides00302PROTEIN CBG26694
Paelopatides00303REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides00304
Paelopatides00305PROTEIN CBG26694
Paelopatides00306MONOCARBOXYLATE TRANSPORTER
Paelopatides00307TYROSINE SPECIFIC PROTEIN PHOSPHATASE AND DUAL SPECIFICITY PROTEIN PHOSPHATASE
Paelopatides00308
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