About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides00103-
Paelopatides00104PROTEIN CBG26694
Paelopatides00105PROTEIN CBG26694
Paelopatides00106REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides00107NON-LTR RETROLELEMENT REVERSE TRANSCRIPTASE-LIKE PROTEIN-RELATED
Paelopatides00108-
Paelopatides00109ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides00110REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides00111-
Paelopatides00112AMINO ACID TRANSPORTER
Paelopatides00113-
Paelopatides00114-
Paelopatides00115-
Paelopatides00116SULFOTRANSFERASE SULT
Paelopatides00117SULFOTRANSFERASE SULT
Paelopatides00118-
Paelopatides00119MICROSOMAL SIGNAL PEPTIDASE 12 KDA SUBUNIT
Paelopatides00120PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides00121ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides00122TRANSPOSASE, PUTATIVE-RELATED
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