The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides00364 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides00366 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides00367 | SODIUM-BILE ACID COTRANSPORTER |
Paelopatides00368 | |
Paelopatides00369 | SODIUM-BILE ACID COTRANSPORTER |
Paelopatides00370 | SODIUM-BILE ACID COTRANSPORTER |
Paelopatides00371 | PROTEIN CBG26694 |
Paelopatides00372 | |
Paelopatides00373 | 2-OXOGLUTARATE DEHYDROGENASE |
Paelopatides00374 | |
Paelopatides00375 | IP13529P |
Paelopatides00376 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides00377 | EARLY GAMETOCYTE ENRICHED PHOSPHOPROTEIN EGXP |
Paelopatides00378 | LD44762P |
Paelopatides00379 | 40S RIBOSOMAL PROTEIN S30/UBIQUITIN-LIKE PROTEIN FUBI |
Paelopatides00380 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides00381 | |
Paelopatides00382 | SPECTRIN/FILAMIN RELATED CYTOSKELETAL PROTEIN |
Paelopatides00383 | ACYL-COA DEHYDROGENASE |
Paelopatides00384 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides00385 | VOLTAGE-DEPENDENT CALCIUM CHANNEL SUBUNIT ALPHA-2/DELTA-RELATED |
Paelopatides00386 | BONUS, ISOFORM C-RELATED |
Paelopatides00387 | |
Paelopatides00388 | |
Paelopatides00389 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides00390 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides00391 | PROTEIN CBG26694 |
Paelopatides00392 | EPM2A-INTERACTING PROTEIN 1 |
Paelopatides00393 | BUCENTAUR RELATED |
Paelopatides00394 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides00396 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides00397 | |
Paelopatides00398 | EXS-RELATED PROTEIN |
Paelopatides00399 | IG-LIKE DOMAIN-CONTAINING PROTEIN |
Paelopatides00400 | NETRIN RECEPTOR UNC5 |
Paelopatides00401 | |
Paelopatides00402 | |
Paelopatides00403 | |
Paelopatides00404 | SULFATE TRANSPORTER |
Paelopatides00405 | PLEXIN |
Paelopatides00406 | |
Paelopatides00407 | SI:CH211-196P9.1-RELATED |
Paelopatides00408 | |
Paelopatides00409 | HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED |
Paelopatides00410 | ATP-DEPENDENT DNA HELICASE |
Paelopatides00411 | HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED |
Paelopatides00412 | TRANSPOSON |
Paelopatides00413 | PROTEIN CBG26694 |
Paelopatides00414 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides00415 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |